Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 SPTSSB-204ENST00000617024 1292 ntBASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 AC084121.4-201ENST00000641598 221 ntBASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 AF228730.8-201ENST00000642140 221 ntBASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 AC132872.4-202ENST00000622924 2756 ntBASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 AC006449.6-201ENST00000612330 2296 ntBASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 AL592424.1-201ENST00000563624 1536 ntBASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 AC023141.5-201ENST00000458585 616 ntBASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 AC098859.1-201ENST00000502915 1238 ntBASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 KRT18P28-201ENST00000453838 1332 ntBASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LYSMD3Q7Z3D4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 AC009093.7-201ENST00000623853 1223 ntBASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms