Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
FOXR1Q6PIV2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 AC023274.1-201ENST00000418278 595 ntBASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXR1Q6PIV2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 YBX2P1-201ENST00000394192 760 ntBASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 RPSAP43-201ENST00000402237 625 ntBASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 GPX1P2-201ENST00000429271 606 ntBASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 AC112482.1-201ENST00000492080 688 ntBASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 AC040169.1-201ENST00000565382 521 ntBASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 AC079781.4-201ENST00000641908 219 ntBASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXR1Q6PIV2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms