Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFWD3Q6PCD5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFWD3Q6PCD5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 CYMP-203ENST00000474680 1263 ntBASIC17■□□□□ 0.31
RFWD3Q6PCD5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 AL355385.1-201ENST00000606123 409 ntBASIC17■□□□□ 0.31
RFWD3Q6PCD5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 AP001059.3-201ENST00000619053 235 ntBASIC17■□□□□ 0.31
RFWD3Q6PCD5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFWD3Q6PCD5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17■□□□□ 0.31
RFWD3Q6PCD5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 AC005052.1-201ENST00000625181 2492 ntBASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFWD3Q6PCD5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 GGT3P-204ENST00000453783 1664 ntBASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 AC020765.3-201ENST00000613051 740 ntBASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 AC093512.1-201ENST00000617969 520 ntBASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 PCGF3-213ENST00000620529 1899 ntBASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 AC008677.1-201ENST00000519230 1561 ntBASIC16.98■□□□□ 0.31
RFWD3Q6PCD5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms