Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.35□□□□□ -0.43
MRPL54Q6P161 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
MRPL54Q6P161 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.35□□□□□ -0.43
MRPL54Q6P161 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
MRPL54Q6P161 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.35□□□□□ -0.43
MRPL54Q6P161 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 AC007191.1-201ENST00000623179 2995 ntBASIC12.35□□□□□ -0.43
MRPL54Q6P161 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
MRPL54Q6P161 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.35□□□□□ -0.43
MRPL54Q6P161 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL54Q6P161 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 CICP14-201ENST00000629111 2732 ntBASIC12.34□□□□□ -0.43
MRPL54Q6P161 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 IGHGP-201ENST00000390555 1178 ntBASIC12.34□□□□□ -0.43
MRPL54Q6P161 AP000523.1-201ENST00000398242 1049 ntBASIC12.34□□□□□ -0.43
MRPL54Q6P161 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 AL390955.1-201ENST00000428694 934 ntBASIC12.34□□□□□ -0.43
MRPL54Q6P161 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 POU5F1P6-201ENST00000466990 990 ntBASIC12.34□□□□□ -0.43
MRPL54Q6P161 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 AL512604.3-201ENST00000569583 964 ntBASIC12.34□□□□□ -0.43
MRPL54Q6P161 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 AC079602.3-201ENST00000623931 403 ntBASIC12.34□□□□□ -0.43
MRPL54Q6P161 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 LINC00552-201ENST00000625151 2579 ntBASIC12.34□□□□□ -0.43
MRPL54Q6P161 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 AC005840.4-201ENST00000541242 2494 ntBASIC12.34□□□□□ -0.43
MRPL54Q6P161 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 AL512652.2-201ENST00000625156 1716 ntBASIC12.34□□□□□ -0.43
MRPL54Q6P161 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
MRPL54Q6P161 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL54Q6P161 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
MRPL54Q6P161 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
MRPL54Q6P161 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
MRPL54Q6P161 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms