Protein–RNA interactions for Protein: Q15223

NECTIN1, Nectin-1, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1Q15223 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN1Q15223 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN1Q15223 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NECTIN1Q15223 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN1Q15223 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NECTIN1Q15223 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN1Q15223 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.23■□□□□ 0.67
NECTIN1Q15223 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN1Q15223 PRAL-201ENST00000624952 3286 ntBASIC19.22■□□□□ 0.67
NECTIN1Q15223 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 RPS8P6-201ENST00000426177 609 ntBASIC19.22■□□□□ 0.67
NECTIN1Q15223 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 RARRES2P9-201ENST00000565168 469 ntBASIC19.22■□□□□ 0.67
NECTIN1Q15223 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN1Q15223 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NECTIN1Q15223 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 AL627223.1-201ENST00000416693 442 ntBASIC19.21■□□□□ 0.67
NECTIN1Q15223 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.21■□□□□ 0.67
NECTIN1Q15223 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN1Q15223 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN1Q15223 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN1Q15223 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN1Q15223 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN1Q15223 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN1Q15223 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN1Q15223 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN1Q15223 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN1Q15223 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NECTIN1Q15223 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.2■□□□□ 0.66
NECTIN1Q15223 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN1Q15223 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN1Q15223 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
NECTIN1Q15223 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NECTIN1Q15223 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN1Q15223 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NECTIN1Q15223 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.2■□□□□ 0.66
NECTIN1Q15223 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN1Q15223 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN1Q15223 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.2■□□□□ 0.66
NECTIN1Q15223 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms