Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH11P55287 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH11P55287 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH11P55287 PGAM5P1-201ENST00000518923 814 ntBASIC14.99□□□□□ -0.01
CDH11P55287 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH11P55287 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH11P55287 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.99□□□□□ -0.01
CDH11P55287 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH11P55287 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH11P55287 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH11P55287 AL513477.1-201ENST00000602865 2407 ntBASIC14.99□□□□□ -0.01
CDH11P55287 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH11P55287 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDH11P55287 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 KRT8P39-201ENST00000396270 1433 ntBASIC14.99□□□□□ -0.01
CDH11P55287 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH11P55287 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDH11P55287 AC126177.1-201ENST00000547829 2218 ntBASIC14.98□□□□□ -0.01
CDH11P55287 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CDH11P55287 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH11P55287 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH11P55287 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH11P55287 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH11P55287 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH11P55287 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CDH11P55287 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH11P55287 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.98□□□□□ -0.01
CDH11P55287 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH11P55287 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.98□□□□□ -0.01
CDH11P55287 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH11P55287 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.98□□□□□ -0.01
CDH11P55287 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 AC040169.1-201ENST00000565382 521 ntBASIC14.98□□□□□ -0.01
CDH11P55287 AC064836.3-201ENST00000607928 673 ntBASIC14.98□□□□□ -0.01
CDH11P55287 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
CDH11P55287 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH11P55287 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CDH11P55287 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CDH11P55287 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
CDH11P55287 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH11P55287 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CDH11P55287 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 REXO1L8P-201ENST00000604378 1897 ntBASIC14.97□□□□□ -0.01
CDH11P55287 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH11P55287 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDH11P55287 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 AC144831.1-201ENST00000573312 2656 ntBASIC14.97□□□□□ -0.01
CDH11P55287 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDH11P55287 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH11P55287 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH11P55287 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CDH11P55287 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.97□□□□□ -0.01
CDH11P55287 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH11P55287 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CDH11P55287 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH11P55287 POU5F1P6-201ENST00000466990 990 ntBASIC14.97□□□□□ -0.01
CDH11P55287 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH11P55287 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CDH11P55287 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH11P55287 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH11P55287 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms