Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.97□□□□□ -0.17
TNFSF4P23510 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
TNFSF4P23510 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFSF4P23510 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.97□□□□□ -0.17
TNFSF4P23510 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TNFSF4P23510 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TNFSF4P23510 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.97□□□□□ -0.17
TNFSF4P23510 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.96□□□□□ -0.17
TNFSF4P23510 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFSF4P23510 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.96□□□□□ -0.17
TNFSF4P23510 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TNFSF4P23510 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFSF4P23510 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TNFSF4P23510 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFSF4P23510 NKILA-202ENST00000614771 2598 ntBASIC13.96□□□□□ -0.17
TNFSF4P23510 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.96□□□□□ -0.17
TNFSF4P23510 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
TNFSF4P23510 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TNFSF4P23510 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
TNFSF4P23510 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFSF4P23510 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.96□□□□□ -0.17
TNFSF4P23510 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFSF4P23510 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.96□□□□□ -0.17
TNFSF4P23510 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.96□□□□□ -0.17
TNFSF4P23510 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFSF4P23510 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.96□□□□□ -0.17
TNFSF4P23510 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.96□□□□□ -0.17
TNFSF4P23510 AC073389.1-201ENST00000595595 795 ntBASIC13.96□□□□□ -0.17
TNFSF4P23510 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.96□□□□□ -0.17
TNFSF4P23510 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.96□□□□□ -0.17
TNFSF4P23510 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFSF4P23510 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
TNFSF4P23510 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFSF4P23510 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFSF4P23510 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.96□□□□□ -0.18
TNFSF4P23510 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TNFSF4P23510 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.96□□□□□ -0.18
TNFSF4P23510 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TNFSF4P23510 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TNFSF4P23510 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.95□□□□□ -0.18
TNFSF4P23510 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.95□□□□□ -0.18
TNFSF4P23510 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TNFSF4P23510 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.95□□□□□ -0.18
TNFSF4P23510 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.95□□□□□ -0.18
TNFSF4P23510 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.95□□□□□ -0.18
TNFSF4P23510 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.95□□□□□ -0.18
TNFSF4P23510 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.95□□□□□ -0.18
TNFSF4P23510 AC098859.1-201ENST00000502915 1238 ntBASIC13.95□□□□□ -0.18
TNFSF4P23510 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.95□□□□□ -0.18
TNFSF4P23510 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 AP000842.3-202ENST00000569238 1080 ntBASIC13.95□□□□□ -0.18
TNFSF4P23510 AC024267.1-201ENST00000582320 895 ntBASIC13.95□□□□□ -0.18
TNFSF4P23510 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.95□□□□□ -0.18
TNFSF4P23510 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.95□□□□□ -0.18
TNFSF4P23510 SPTSSB-204ENST00000617024 1292 ntBASIC13.95□□□□□ -0.18
TNFSF4P23510 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TNFSF4P23510 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.95□□□□□ -0.18
TNFSF4P23510 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.95□□□□□ -0.18
TNFSF4P23510 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TNFSF4P23510 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms