Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.16□□□□□ -0.14
CCNKO75909 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.16□□□□□ -0.14
CCNKO75909 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.16□□□□□ -0.14
CCNKO75909 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.16□□□□□ -0.14
CCNKO75909 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CCNKO75909 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.16□□□□□ -0.14
CCNKO75909 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCNKO75909 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCNKO75909 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCNKO75909 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.16□□□□□ -0.14
CCNKO75909 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.15□□□□□ -0.14
CCNKO75909 LINC00895-201ENST00000629028 1637 ntBASIC14.15□□□□□ -0.14
CCNKO75909 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCNKO75909 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.15□□□□□ -0.14
CCNKO75909 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.15□□□□□ -0.14
CCNKO75909 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.15□□□□□ -0.14
CCNKO75909 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.15□□□□□ -0.14
CCNKO75909 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.15□□□□□ -0.14
CCNKO75909 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 AL023803.3-201ENST00000615559 522 ntBASIC14.15□□□□□ -0.14
CCNKO75909 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.15□□□□□ -0.14
CCNKO75909 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCNKO75909 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCNKO75909 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCNKO75909 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.15□□□□□ -0.15
CCNKO75909 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
CCNKO75909 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
CCNKO75909 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
CCNKO75909 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCNKO75909 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCNKO75909 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCNKO75909 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCNKO75909 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CCNKO75909 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.14□□□□□ -0.15
CCNKO75909 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCNKO75909 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.14□□□□□ -0.15
CCNKO75909 MROH4P-201ENST00000431302 1578 ntBASIC14.14□□□□□ -0.15
CCNKO75909 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms