Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.37■□□□□ 0.21
RFPL1O75677 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.37■□□□□ 0.21
RFPL1O75677 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFPL1O75677 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RFPL1O75677 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFPL1O75677 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RFPL1O75677 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.36■□□□□ 0.21
RFPL1O75677 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFPL1O75677 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RFPL1O75677 AP006288.1-201ENST00000446065 395 ntBASIC16.36■□□□□ 0.21
RFPL1O75677 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.36■□□□□ 0.21
RFPL1O75677 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.36■□□□□ 0.21
RFPL1O75677 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFPL1O75677 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.36■□□□□ 0.21
RFPL1O75677 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
RFPL1O75677 AC092919.2-201ENST00000623631 1645 ntBASIC16.36■□□□□ 0.21
RFPL1O75677 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.36■□□□□ 0.21
RFPL1O75677 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.36■□□□□ 0.21
RFPL1O75677 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.36■□□□□ 0.21
RFPL1O75677 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFPL1O75677 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.35■□□□□ 0.21
RFPL1O75677 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
RFPL1O75677 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.35■□□□□ 0.21
RFPL1O75677 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RFPL1O75677 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RFPL1O75677 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RFPL1O75677 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.35■□□□□ 0.21
RFPL1O75677 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.35■□□□□ 0.21
RFPL1O75677 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.35■□□□□ 0.21
RFPL1O75677 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.35■□□□□ 0.21
RFPL1O75677 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.35■□□□□ 0.21
RFPL1O75677 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.35■□□□□ 0.21
RFPL1O75677 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RFPL1O75677 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.35■□□□□ 0.21
RFPL1O75677 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
RFPL1O75677 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.35■□□□□ 0.21
RFPL1O75677 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.35■□□□□ 0.21
RFPL1O75677 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.35■□□□□ 0.21
RFPL1O75677 AC008667.4-201ENST00000607370 168 ntBASIC16.35■□□□□ 0.21
RFPL1O75677 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.35■□□□□ 0.21
RFPL1O75677 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RFPL1O75677 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.35■□□□□ 0.21
RFPL1O75677 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RFPL1O75677 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFPL1O75677 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFPL1O75677 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms