Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
ACTN4O43707 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.25■□□□□ 0.51
ACTN4O43707 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.25■□□□□ 0.51
ACTN4O43707 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.25■□□□□ 0.51
ACTN4O43707 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.25■□□□□ 0.51
ACTN4O43707 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.25■□□□□ 0.51
ACTN4O43707 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ACTN4O43707 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.25■□□□□ 0.51
ACTN4O43707 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACTN4O43707 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ACTN4O43707 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ACTN4O43707 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ACTN4O43707 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ACTN4O43707 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ACTN4O43707 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.24■□□□□ 0.51
ACTN4O43707 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.24■□□□□ 0.51
ACTN4O43707 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
ACTN4O43707 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.24■□□□□ 0.51
ACTN4O43707 AL365330.1-201ENST00000607459 531 ntBASIC18.24■□□□□ 0.51
ACTN4O43707 BX640515.1-201ENST00000617215 977 ntBASIC18.24■□□□□ 0.51
ACTN4O43707 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.24■□□□□ 0.51
ACTN4O43707 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ACTN4O43707 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACTN4O43707 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ACTN4O43707 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.23■□□□□ 0.51
ACTN4O43707 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.23■□□□□ 0.51
ACTN4O43707 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ACTN4O43707 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.23■□□□□ 0.51
ACTN4O43707 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ACTN4O43707 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.23■□□□□ 0.51
ACTN4O43707 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.23■□□□□ 0.51
ACTN4O43707 GPX1P2-201ENST00000429271 606 ntBASIC18.23■□□□□ 0.51
ACTN4O43707 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
ACTN4O43707 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.23■□□□□ 0.51
ACTN4O43707 AL138918.1-201ENST00000568306 659 ntBASIC18.23■□□□□ 0.51
ACTN4O43707 MIR4321-201ENST00000592276 80 ntBASIC18.23■□□□□ 0.51
ACTN4O43707 AC140113.2-201ENST00000604370 208 ntBASIC18.23■□□□□ 0.51
ACTN4O43707 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.23■□□□□ 0.51
ACTN4O43707 AL161645.1-201ENST00000622716 1255 ntBASIC18.23■□□□□ 0.51
ACTN4O43707 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.23■□□□□ 0.51
ACTN4O43707 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.23■□□□□ 0.51
ACTN4O43707 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 AC104640.1-201ENST00000562617 2109 ntBASIC18.23■□□□□ 0.51
ACTN4O43707 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.23■□□□□ 0.51
ACTN4O43707 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.23■□□□□ 0.51
ACTN4O43707 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ACTN4O43707 FOXO1B-201ENST00000504678 1527 ntBASIC18.23■□□□□ 0.51
ACTN4O43707 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.23■□□□□ 0.51
ACTN4O43707 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ACTN4O43707 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.22■□□□□ 0.51
ACTN4O43707 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ACTN4O43707 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.22■□□□□ 0.51
ACTN4O43707 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ACTN4O43707 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ACTN4O43707 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ACTN4O43707 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.22■□□□□ 0.51
ACTN4O43707 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.22■□□□□ 0.51
ACTN4O43707 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ACTN4O43707 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ACTN4O43707 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ACTN4O43707 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
ACTN4O43707 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ACTN4O43707 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ACTN4O43707 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms