Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 HIST1H2APS4-201ENST00000362070 348 ntBASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 FAM197Y1-201ENST00000421178 764 ntBASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC068472.1-201ENST00000474589 881 ntBASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AL512604.3-201ENST00000569583 964 ntBASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC022517.1-201ENST00000592429 346 ntBASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AL157888.1-201ENST00000631930 593 ntBASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC004817.3-201ENST00000602957 2129 ntBASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AL049757.1-201ENST00000616842 1596 ntBASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC007686.3-201ENST00000619017 3487 ntBASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AP003680.1-201ENST00000598970 3660 ntBASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms