Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 HAUS4P1-201ENST00000406739 1145 ntBASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 AC079776.4-201ENST00000511039 504 ntBASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 AC022532.1-201ENST00000624563 1728 ntBASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.55■□□□□ 0.24
TCRBV7S3A2A0A539 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 KRT19P2-202ENST00000557173 1012 ntBASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 AC064836.3-201ENST00000607928 673 ntBASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 AC007064.4-201ENST00000637740 555 ntBASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 AL589702.1-201ENST00000641229 1509 ntBASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV7S3A2A0A539 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 AC023824.1-201ENST00000562945 2975 ntBASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 SSR4P1-203ENST00000599569 2260 ntBASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 AC007967.2-201ENST00000432613 625 ntBASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV7S3A2A0A539 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms