Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 AC138894.3-201ENST00000603787 634 ntBASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 AL805961.1-202ENST00000641562 540 ntBASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 AC020658.6-201ENST00000623564 1870 ntBASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 AC136621.1-201ENST00000624017 2304 ntBASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms