Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 UXT-AS1-201ENST00000590504 1525 ntBASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPH3AQ9Y2J0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 SPCS2P4-201ENST00000436160 681 ntBASIC15□□□□□ -0.01
RPH3AQ9Y2J0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 AL096865.1-201ENST00000606796 927 ntBASIC15□□□□□ -0.01
RPH3AQ9Y2J0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 GPAA1P2-202ENST00000606848 1787 ntBASIC15□□□□□ -0.01
RPH3AQ9Y2J0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPH3AQ9Y2J0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 BCRP1-201ENST00000444246 691 ntBASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 AL138918.1-201ENST00000568306 659 ntBASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms