Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHPF2Q9P2E5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHPF2Q9P2E5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHPF2Q9P2E5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHPF2Q9P2E5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHPF2Q9P2E5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHPF2Q9P2E5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CHPF2Q9P2E5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.55■□□□□ 0.88
CHPF2Q9P2E5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 AL589987.1-201ENST00000453380 819 ntBASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 AC025048.3-201ENST00000590609 569 ntBASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 AC005702.4-201ENST00000618393 416 ntBASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 AC007541.1-201ENST00000570282 1469 ntBASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 BNIP3P1-202ENST00000550043 1585 ntBASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.54■□□□□ 0.88
CHPF2Q9P2E5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 AC004987.2-201ENST00000395959 1148 ntBASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 SDHAP3-202ENST00000515467 728 ntBASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 API5-211ENST00000534695 560 ntTSL 5 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHPF2Q9P2E5 AC006449.6-201ENST00000612330 2296 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms