Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 AC006538.3-201ENST00000612495 578 ntBASIC16.84■□□□□ 0.29
C9orf72Q96LT7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 AC004706.3-202ENST00000621574 984 ntBASIC16.84■□□□□ 0.29
C9orf72Q96LT7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 AC013268.4-201ENST00000637413 2228 ntBASIC16.84■□□□□ 0.29
C9orf72Q96LT7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C9orf72Q96LT7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.83■□□□□ 0.29
C9orf72Q96LT7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
C9orf72Q96LT7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
C9orf72Q96LT7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
C9orf72Q96LT7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 AC073621.1-201ENST00000392730 636 ntBASIC16.83■□□□□ 0.28
C9orf72Q96LT7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 FAM197Y3-203ENST00000618346 717 ntBASIC16.83■□□□□ 0.28
C9orf72Q96LT7 AC005593.1-201ENST00000624894 515 ntBASIC16.83■□□□□ 0.28
C9orf72Q96LT7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms