Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 RNF216P1-203ENST00000404404 2427 ntBASIC19.02■□□□□ 0.64
TRIM47Q96LD4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.02■□□□□ 0.64
TRIM47Q96LD4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 AC087499.6-201ENST00000411576 835 ntBASIC19.02■□□□□ 0.64
TRIM47Q96LD4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 BANF1P1-201ENST00000553684 263 ntBASIC19.02■□□□□ 0.64
TRIM47Q96LD4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM47Q96LD4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM47Q96LD4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM47Q96LD4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM47Q96LD4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM47Q96LD4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM47Q96LD4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.01■□□□□ 0.63
TRIM47Q96LD4 AC022210.1-201ENST00000449856 793 ntBASIC19.01■□□□□ 0.63
TRIM47Q96LD4 PRYP6-201ENST00000514804 343 ntBASIC19.01■□□□□ 0.63
TRIM47Q96LD4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 CYP2A7P1-201ENST00000595391 815 ntBASIC19.01■□□□□ 0.63
TRIM47Q96LD4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM47Q96LD4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19■□□□□ 0.63
TRIM47Q96LD4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM47Q96LD4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM47Q96LD4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM47Q96LD4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM47Q96LD4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRIM47Q96LD4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM47Q96LD4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM47Q96LD4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM47Q96LD4 SPDYE19P-201ENST00000338590 713 ntBASIC19■□□□□ 0.63
TRIM47Q96LD4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM47Q96LD4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19■□□□□ 0.63
TRIM47Q96LD4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
TRIM47Q96LD4 AL080243.2-201ENST00000418783 582 ntBASIC19■□□□□ 0.63
TRIM47Q96LD4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM47Q96LD4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19■□□□□ 0.63
TRIM47Q96LD4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19■□□□□ 0.63
TRIM47Q96LD4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19■□□□□ 0.63
TRIM47Q96LD4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
TRIM47Q96LD4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19■□□□□ 0.63
TRIM47Q96LD4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19■□□□□ 0.63
TRIM47Q96LD4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19■□□□□ 0.63
TRIM47Q96LD4 BTBD7P1-201ENST00000447253 1453 ntBASIC19■□□□□ 0.63
TRIM47Q96LD4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM47Q96LD4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM47Q96LD4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19■□□□□ 0.63
TRIM47Q96LD4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19■□□□□ 0.63
TRIM47Q96LD4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM47Q96LD4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM47Q96LD4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM47Q96LD4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
TRIM47Q96LD4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19■□□□□ 0.63
TRIM47Q96LD4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms