Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALPK3Q96L96 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALPK3Q96L96 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ALPK3Q96L96 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ALPK3Q96L96 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ALPK3Q96L96 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
ALPK3Q96L96 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ALPK3Q96L96 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
ALPK3Q96L96 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
ALPK3Q96L96 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ALPK3Q96L96 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ALPK3Q96L96 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.39■□□□□ 0.37
ALPK3Q96L96 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
ALPK3Q96L96 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.39■□□□□ 0.37
ALPK3Q96L96 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.39■□□□□ 0.37
ALPK3Q96L96 AC104982.3-201ENST00000581995 514 ntBASIC17.39■□□□□ 0.37
ALPK3Q96L96 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ALPK3Q96L96 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.39■□□□□ 0.37
ALPK3Q96L96 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 DRD5P1-201ENST00000456605 1438 ntBASIC17.39■□□□□ 0.37
ALPK3Q96L96 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.39■□□□□ 0.37
ALPK3Q96L96 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.39■□□□□ 0.37
ALPK3Q96L96 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.39■□□□□ 0.37
ALPK3Q96L96 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.39■□□□□ 0.37
ALPK3Q96L96 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALPK3Q96L96 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 AC114501.1-201ENST00000445949 172 ntBASIC17.38■□□□□ 0.37
ALPK3Q96L96 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 AL133499.1-201ENST00000596207 608 ntBASIC17.38■□□□□ 0.37
ALPK3Q96L96 AF254983.2-201ENST00000612331 135 ntBASIC17.38■□□□□ 0.37
ALPK3Q96L96 AC244452.3-201ENST00000636814 210 ntBASIC17.38■□□□□ 0.37
ALPK3Q96L96 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 AL138709.1-201ENST00000614840 1693 ntBASIC17.38■□□□□ 0.37
ALPK3Q96L96 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 AL121723.1-201ENST00000445194 1519 ntBASIC17.38■□□□□ 0.37
ALPK3Q96L96 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ALPK3Q96L96 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALPK3Q96L96 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALPK3Q96L96 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALPK3Q96L96 AC022217.1-201ENST00000521069 738 ntBASIC17.37■□□□□ 0.37
ALPK3Q96L96 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALPK3Q96L96 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALPK3Q96L96 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALPK3Q96L96 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALPK3Q96L96 MIR769-201ENST00000390225 118 ntBASIC17.37■□□□□ 0.37
ALPK3Q96L96 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 POM121L10P-201ENST00000436994 1285 ntBASIC17.37■□□□□ 0.37
ALPK3Q96L96 NUP210P1-202ENST00000504322 710 ntBASIC17.37■□□□□ 0.37
ALPK3Q96L96 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.37■□□□□ 0.37
ALPK3Q96L96 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms