Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 MIR3615-201ENST00000581999 87 ntBASIC19.52■□□□□ 0.72
SNED1Q8TER0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 LINC01144-201ENST00000626198 1710 ntBASIC19.52■□□□□ 0.72
SNED1Q8TER0 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SNED1Q8TER0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNED1Q8TER0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.52■□□□□ 0.71
SNED1Q8TER0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNED1Q8TER0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNED1Q8TER0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.52■□□□□ 0.71
SNED1Q8TER0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNED1Q8TER0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNED1Q8TER0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNED1Q8TER0 BRWD1P1-201ENST00000401091 371 ntBASIC19.51■□□□□ 0.71
SNED1Q8TER0 SOCS2P1-201ENST00000417727 557 ntBASIC19.51■□□□□ 0.71
SNED1Q8TER0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNED1Q8TER0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNED1Q8TER0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNED1Q8TER0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNED1Q8TER0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNED1Q8TER0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNED1Q8TER0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 RNF216P1-203ENST00000404404 2427 ntBASIC19.51■□□□□ 0.71
SNED1Q8TER0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNED1Q8TER0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNED1Q8TER0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNED1Q8TER0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNED1Q8TER0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 RPL13AP20-201ENST00000459725 609 ntBASIC19.51■□□□□ 0.71
SNED1Q8TER0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.51■□□□□ 0.71
SNED1Q8TER0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNED1Q8TER0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNED1Q8TER0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNED1Q8TER0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNED1Q8TER0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNED1Q8TER0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNED1Q8TER0 AC080080.1-201ENST00000625121 2420 ntBASIC19.5■□□□□ 0.71
SNED1Q8TER0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNED1Q8TER0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNED1Q8TER0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNED1Q8TER0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNED1Q8TER0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SNED1Q8TER0 AC000095.1-201ENST00000603208 874 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms