Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 AC091607.1-201ENST00000490318 1060 ntBASIC14.15□□□□□ -0.14
BEST4Q8NFU0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.15□□□□□ -0.14
BEST4Q8NFU0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.15□□□□□ -0.14
BEST4Q8NFU0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
BEST4Q8NFU0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.15□□□□□ -0.15
BEST4Q8NFU0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
BEST4Q8NFU0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 AC002310.6-201ENST00000624451 1377 ntBASIC14.14□□□□□ -0.15
BEST4Q8NFU0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.14□□□□□ -0.15
BEST4Q8NFU0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
BEST4Q8NFU0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms