Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 AP001059.3-201ENST00000619053 235 ntBASIC21.37■■□□□ 1.01
NGEFQ8N5V2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 PCDHA1-201ENST00000378133 2726 ntBASIC21.37■■□□□ 1.01
NGEFQ8N5V2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC21.37■■□□□ 1.01
NGEFQ8N5V2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 PCDH8P1-201ENST00000428983 2773 ntBASIC21.36■■□□□ 1.01
NGEFQ8N5V2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 SPDYE14P-201ENST00000442619 822 ntBASIC21.36■■□□□ 1.01
NGEFQ8N5V2 CNN2P2-201ENST00000443536 909 ntBASIC21.36■■□□□ 1.01
NGEFQ8N5V2 CNN2P3-201ENST00000450201 906 ntBASIC21.36■■□□□ 1.01
NGEFQ8N5V2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 AL136317.3-201ENST00000618497 906 ntBASIC21.36■■□□□ 1.01
NGEFQ8N5V2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.36■■□□□ 1.01
NGEFQ8N5V2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 HLA-H-201ENST00000383620 1096 ntBASIC21.35■■□□□ 1.01
NGEFQ8N5V2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 AC067863.1-201ENST00000494933 530 ntBASIC21.35■■□□□ 1.01
NGEFQ8N5V2 AC051619.7-201ENST00000568314 623 ntBASIC21.35■■□□□ 1.01
NGEFQ8N5V2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.35■■□□□ 1.01
NGEFQ8N5V2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NGEFQ8N5V2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NGEFQ8N5V2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.34■■□□□ 1.01
NGEFQ8N5V2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC21.34■■□□□ 1.01
NGEFQ8N5V2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
NGEFQ8N5V2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
NGEFQ8N5V2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
NGEFQ8N5V2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NGEFQ8N5V2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NGEFQ8N5V2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms