Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 MCCD1P2-201ENST00000423228 335 ntBASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 AL671277.1-201ENST00000429656 993 ntBASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC116Q8IYX3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
CCDC116Q8IYX3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 RARRES2P8-201ENST00000566335 367 ntBASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 AC092902.6-201ENST00000641783 218 ntBASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC116Q8IYX3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 TFAMP1-201ENST00000412727 736 ntBASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 AC004832.2-201ENST00000426397 482 ntBASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 PRYP6-201ENST00000514804 343 ntBASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 MTND2P7-201ENST00000521337 640 ntBASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 AL138918.1-201ENST00000568306 659 ntBASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 AP001002.2-201ENST00000625137 386 ntBASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 AC024909.3-201ENST00000611513 2257 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms