Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC005089.1-201ENST00000619486 2241 ntBASIC16.26■□□□□ 0.19
APLFQ8IW19 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
APLFQ8IW19 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 LINC02012-201ENST00000608206 1725 ntBASIC16.26■□□□□ 0.19
APLFQ8IW19 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 AC003669.1-201ENST00000334569 611 ntBASIC16.26■□□□□ 0.19
APLFQ8IW19 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
APLFQ8IW19 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 MKNK2P1-201ENST00000437526 628 ntBASIC16.26■□□□□ 0.19
APLFQ8IW19 HCG4B-203ENST00000450128 991 ntBASIC16.26■□□□□ 0.19
APLFQ8IW19 SIGLEC30P-201ENST00000455569 941 ntBASIC16.26■□□□□ 0.19
APLFQ8IW19 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.26■□□□□ 0.19
APLFQ8IW19 AC108073.2-201ENST00000464002 357 ntBASIC16.26■□□□□ 0.19
APLFQ8IW19 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.26■□□□□ 0.19
APLFQ8IW19 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.26■□□□□ 0.19
APLFQ8IW19 SNHG9-202ENST00000564014 471 ntBASIC16.26■□□□□ 0.19
APLFQ8IW19 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
APLFQ8IW19 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.26■□□□□ 0.19
APLFQ8IW19 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.26■□□□□ 0.19
APLFQ8IW19 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.26■□□□□ 0.19
APLFQ8IW19 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
APLFQ8IW19 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
APLFQ8IW19 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
APLFQ8IW19 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.25■□□□□ 0.19
APLFQ8IW19 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.25■□□□□ 0.19
APLFQ8IW19 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.25■□□□□ 0.19
APLFQ8IW19 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.25■□□□□ 0.19
APLFQ8IW19 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.25■□□□□ 0.19
APLFQ8IW19 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 AC073347.1-201ENST00000421633 2643 ntBASIC16.25■□□□□ 0.19
APLFQ8IW19 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
APLFQ8IW19 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
APLFQ8IW19 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.25■□□□□ 0.19
APLFQ8IW19 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 AC007292.2-201ENST00000593524 1812 ntBASIC16.25■□□□□ 0.19
APLFQ8IW19 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.25■□□□□ 0.19
APLFQ8IW19 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
APLFQ8IW19 KLF4P1-201ENST00000412782 1185 ntBASIC16.25■□□□□ 0.19
APLFQ8IW19 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 RPS15P9-201ENST00000494093 319 ntBASIC16.25■□□□□ 0.19
APLFQ8IW19 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.25■□□□□ 0.19
APLFQ8IW19 MIR4751-201ENST00000578027 74 ntBASIC16.25■□□□□ 0.19
APLFQ8IW19 MIR4469-201ENST00000583919 79 ntBASIC16.25■□□□□ 0.19
APLFQ8IW19 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
APLFQ8IW19 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
APLFQ8IW19 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.25■□□□□ 0.19
APLFQ8IW19 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.25■□□□□ 0.19
APLFQ8IW19 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
APLFQ8IW19 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
APLFQ8IW19 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.25■□□□□ 0.19
APLFQ8IW19 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
APLFQ8IW19 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.24■□□□□ 0.19
APLFQ8IW19 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APLFQ8IW19 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APLFQ8IW19 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APLFQ8IW19 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APLFQ8IW19 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APLFQ8IW19 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
APLFQ8IW19 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
APLFQ8IW19 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APLFQ8IW19 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APLFQ8IW19 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APLFQ8IW19 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
APLFQ8IW19 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
APLFQ8IW19 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.24■□□□□ 0.19
APLFQ8IW19 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.24■□□□□ 0.19
APLFQ8IW19 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
APLFQ8IW19 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.24■□□□□ 0.19
APLFQ8IW19 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.24■□□□□ 0.19
APLFQ8IW19 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.24■□□□□ 0.19
APLFQ8IW19 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.24■□□□□ 0.19
APLFQ8IW19 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
APLFQ8IW19 AL596442.2-201ENST00000610240 980 ntBASIC16.24■□□□□ 0.19
APLFQ8IW19 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
APLFQ8IW19 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APLFQ8IW19 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms