Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RTTNQ86VV8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.46□□□□□ -0.09
RTTNQ86VV8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RTTNQ86VV8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTTNQ86VV8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RTTNQ86VV8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTTNQ86VV8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.46□□□□□ -0.09
RTTNQ86VV8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTTNQ86VV8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTTNQ86VV8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.46□□□□□ -0.09
RTTNQ86VV8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RTTNQ86VV8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTTNQ86VV8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
RTTNQ86VV8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.46□□□□□ -0.1
RTTNQ86VV8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.46□□□□□ -0.1
RTTNQ86VV8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.46□□□□□ -0.1
RTTNQ86VV8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RTTNQ86VV8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.46□□□□□ -0.1
RTTNQ86VV8 MIR3909-201ENST00000579518 119 ntBASIC14.46□□□□□ -0.1
RTTNQ86VV8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.46□□□□□ -0.1
RTTNQ86VV8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTTNQ86VV8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RTTNQ86VV8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.46□□□□□ -0.1
RTTNQ86VV8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RTTNQ86VV8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.46□□□□□ -0.1
RTTNQ86VV8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.46□□□□□ -0.1
RTTNQ86VV8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTTNQ86VV8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.46□□□□□ -0.1
RTTNQ86VV8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTTNQ86VV8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
RTTNQ86VV8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RTTNQ86VV8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTTNQ86VV8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 MKNK2P1-201ENST00000437526 628 ntBASIC14.45□□□□□ -0.1
RTTNQ86VV8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.45□□□□□ -0.1
RTTNQ86VV8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 OR8S1-201ENST00000310194 1080 ntBASIC14.45□□□□□ -0.1
RTTNQ86VV8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTTNQ86VV8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.45□□□□□ -0.1
RTTNQ86VV8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.44□□□□□ -0.1
RTTNQ86VV8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTTNQ86VV8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTTNQ86VV8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTTNQ86VV8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RTTNQ86VV8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTTNQ86VV8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.44□□□□□ -0.1
RTTNQ86VV8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTTNQ86VV8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTTNQ86VV8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.44□□□□□ -0.1
RTTNQ86VV8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTTNQ86VV8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.44□□□□□ -0.1
RTTNQ86VV8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.44□□□□□ -0.1
RTTNQ86VV8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms