Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00299Q6ZSB3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 U82695.1-201ENST00000635752 1889 ntBASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 AC079776.2-201ENST00000641154 1609 ntBASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 AC125634.1-201ENST00000438758 1403 ntBASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC00299Q6ZSB3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 AC142086.2-201ENST00000569753 217 ntBASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 MPDU1-223ENST00000582151 728 ntBASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 PCDHA3-202ENST00000532566 4594 ntBASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00299Q6ZSB3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 AC117489.1-201ENST00000625169 3217 ntBASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 AP000523.1-201ENST00000398242 1049 ntBASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 NUS1P1-201ENST00000446295 882 ntBASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 AC034232.1-201ENST00000506026 1064 ntBASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 AP003680.1-201ENST00000598970 3660 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms