Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 TUBB8P12-201ENST00000308911 1335 ntBASIC14.32□□□□□ -0.12
C11orf88Q6PI97 TUBB7P-202ENST00000428444 1305 ntBASIC14.32□□□□□ -0.12
C11orf88Q6PI97 TUBB8P7-204ENST00000567960 1332 ntBASIC14.32□□□□□ -0.12
C11orf88Q6PI97 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.32□□□□□ -0.12
C11orf88Q6PI97 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 AC073347.1-201ENST00000421633 2643 ntBASIC14.31□□□□□ -0.12
C11orf88Q6PI97 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 AC096633.1-201ENST00000422446 749 ntBASIC14.31□□□□□ -0.12
C11orf88Q6PI97 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 SAPCD2P3-201ENST00000455031 850 ntBASIC14.31□□□□□ -0.12
C11orf88Q6PI97 EMBP1-201ENST00000458200 901 ntBASIC14.31□□□□□ -0.12
C11orf88Q6PI97 AC106795.1-205ENST00000512851 1056 ntBASIC14.31□□□□□ -0.12
C11orf88Q6PI97 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
C11orf88Q6PI97 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 MTCL1P1-201ENST00000446207 792 ntBASIC14.3□□□□□ -0.12
C11orf88Q6PI97 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms