Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SWSAP1Q6NVH7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 AL512361.1-201ENST00000554200 418 ntBASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 AC008738.7-201ENST00000609744 511 ntBASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SWSAP1Q6NVH7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 PRORSD1P-202ENST00000563365 2154 ntBASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.05■□□□□ 0.48
SWSAP1Q6NVH7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 CYP4F24P-201ENST00000586049 1580 ntBASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 COX20P2-201ENST00000452636 358 ntBASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 RN7SL618P-201ENST00000477850 296 ntBASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 AC010336.2-201ENST00000564226 506 ntBASIC18.04■□□□□ 0.48
SWSAP1Q6NVH7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms