Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 AC005252.3-201ENST00000623855 2258 ntBASIC18.27■□□□□ 0.52
HS1BP3Q53T59 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 LINC01711-201ENST00000598340 967 ntBASIC18.27■□□□□ 0.52
HS1BP3Q53T59 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS1BP3Q53T59 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
HS1BP3Q53T59 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HS1BP3Q53T59 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HS1BP3Q53T59 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HS1BP3Q53T59 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.27■□□□□ 0.51
HS1BP3Q53T59 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
HS1BP3Q53T59 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
HS1BP3Q53T59 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
HS1BP3Q53T59 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.27■□□□□ 0.51
HS1BP3Q53T59 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HS1BP3Q53T59 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 NORAD-201ENST00000565493 5339 ntBASIC18.26■□□□□ 0.51
HS1BP3Q53T59 AGAP7P-201ENST00000582299 2062 ntBASIC18.26■□□□□ 0.51
HS1BP3Q53T59 AGAP14-201ENST00000624701 2060 ntBASIC18.26■□□□□ 0.51
HS1BP3Q53T59 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 AC091951.1-201ENST00000512854 2465 ntBASIC18.26■□□□□ 0.51
HS1BP3Q53T59 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 AC112693.3-201ENST00000624819 1983 ntBASIC18.26■□□□□ 0.51
HS1BP3Q53T59 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS1BP3Q53T59 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.25■□□□□ 0.51
HS1BP3Q53T59 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms