Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 AC108073.2-201ENST00000464002 357 ntBASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 AC092384.3-202ENST00000564646 2873 ntBASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 AC012313.10-201ENST00000623509 926 ntBASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6AP1LQ52LC2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 AP002414.3-201ENST00000589352 1468 ntBASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 RNU1-129P-201ENST00000384064 167 ntBASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 AF186996.4-201ENST00000467186 377 ntBASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 OR7E47P-204ENST00000575924 449 ntBASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 U1.21-201ENST00000580816 167 ntBASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 ACTL9-202ENST00000612068 1252 ntBASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 AC004790.2-201ENST00000623588 572 ntBASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 AC104640.1-201ENST00000562617 2109 ntBASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6AP1LQ52LC2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 FAM185BP-201ENST00000443595 716 ntBASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 FAM197Y8-203ENST00000450145 560 ntBASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 MIR3909-201ENST00000579518 119 ntBASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 AL031055.1-201ENST00000606362 631 ntBASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6AP1LQ52LC2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms