Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPP3CAQ08209 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PPP3CAQ08209 GPS2P2-201ENST00000430745 888 ntBASIC17.56■□□□□ 0.4
PPP3CAQ08209 AC245100.5-201ENST00000452108 331 ntBASIC17.56■□□□□ 0.4
PPP3CAQ08209 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.56■□□□□ 0.4
PPP3CAQ08209 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PPP3CAQ08209 AP000344.2-201ENST00000512987 629 ntBASIC17.56■□□□□ 0.4
PPP3CAQ08209 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPP3CAQ08209 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.56■□□□□ 0.4
PPP3CAQ08209 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PPP3CAQ08209 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
PPP3CAQ08209 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PPP3CAQ08209 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.56■□□□□ 0.4
PPP3CAQ08209 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
PPP3CAQ08209 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PPP3CAQ08209 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPP3CAQ08209 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.56■□□□□ 0.4
PPP3CAQ08209 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.56■□□□□ 0.4
PPP3CAQ08209 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 HAUS4P1-201ENST00000406739 1145 ntBASIC17.55■□□□□ 0.4
PPP3CAQ08209 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 RNA5SP410-201ENST00000516285 106 ntBASIC17.55■□□□□ 0.4
PPP3CAQ08209 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 AC132872.4-202ENST00000622924 2756 ntBASIC17.55■□□□□ 0.4
PPP3CAQ08209 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
PPP3CAQ08209 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPP3CAQ08209 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 HLA-H-201ENST00000383620 1096 ntBASIC17.54■□□□□ 0.4
PPP3CAQ08209 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 AP006288.1-201ENST00000446065 395 ntBASIC17.54■□□□□ 0.4
PPP3CAQ08209 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 PAUPAR-201ENST00000630360 2965 ntBASIC17.54■□□□□ 0.4
PPP3CAQ08209 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.54■□□□□ 0.4
PPP3CAQ08209 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPP3CAQ08209 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.53■□□□□ 0.4
PPP3CAQ08209 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.53■□□□□ 0.4
PPP3CAQ08209 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PPP3CAQ08209 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PPP3CAQ08209 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPP3CAQ08209 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PPP3CAQ08209 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PPP3CAQ08209 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PPP3CAQ08209 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PPP3CAQ08209 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms