Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 KLF2P3-201ENST00000451977 1087 ntBASIC17.29■□□□□ 0.36
CACNA2D1P54289 AC018529.1-201ENST00000613063 361 ntBASIC17.29■□□□□ 0.36
CACNA2D1P54289 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 AC005622.1-201ENST00000636801 1703 ntBASIC17.29■□□□□ 0.36
CACNA2D1P54289 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNA2D1P54289 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA2D1P54289 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.28■□□□□ 0.36
CACNA2D1P54289 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 FAM220BP-201ENST00000377689 816 ntBASIC17.28■□□□□ 0.36
CACNA2D1P54289 HLA-H-201ENST00000383620 1096 ntBASIC17.28■□□□□ 0.36
CACNA2D1P54289 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 AC125807.1-201ENST00000483097 614 ntBASIC17.28■□□□□ 0.36
CACNA2D1P54289 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA2D1P54289 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNA2D1P54289 HYMAI-201ENST00000635591 3347 ntBASIC17.27■□□□□ 0.36
CACNA2D1P54289 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CACNA2D1P54289 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.27■□□□□ 0.36
CACNA2D1P54289 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA2D1P54289 LINC01144-201ENST00000626198 1710 ntBASIC17.27■□□□□ 0.36
CACNA2D1P54289 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA2D1P54289 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA2D1P54289 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA2D1P54289 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA2D1P54289 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.27■□□□□ 0.36
CACNA2D1P54289 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.27■□□□□ 0.36
CACNA2D1P54289 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA2D1P54289 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.27■□□□□ 0.36
CACNA2D1P54289 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.27■□□□□ 0.36
CACNA2D1P54289 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CACNA2D1P54289 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.27■□□□□ 0.36
CACNA2D1P54289 BANF1P1-201ENST00000553684 263 ntBASIC17.27■□□□□ 0.36
CACNA2D1P54289 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA2D1P54289 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA2D1P54289 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA2D1P54289 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CACNA2D1P54289 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.27■□□□□ 0.36
CACNA2D1P54289 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CACNA2D1P54289 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA2D1P54289 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.27■□□□□ 0.35
CACNA2D1P54289 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CACNA2D1P54289 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CACNA2D1P54289 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA2D1P54289 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms