Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
GPC3P51654 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
GPC3P51654 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.94■□□□□ 0.46
GPC3P51654 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 AL079307.3-201ENST00000556114 283 ntBASIC17.94■□□□□ 0.46
GPC3P51654 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.94■□□□□ 0.46
GPC3P51654 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
GPC3P51654 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
GPC3P51654 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.94■□□□□ 0.46
GPC3P51654 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
GPC3P51654 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.94■□□□□ 0.46
GPC3P51654 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
GPC3P51654 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GPC3P51654 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.93■□□□□ 0.46
GPC3P51654 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.93■□□□□ 0.46
GPC3P51654 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
GPC3P51654 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.93■□□□□ 0.46
GPC3P51654 AC005622.1-201ENST00000636801 1703 ntBASIC17.93■□□□□ 0.46
GPC3P51654 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.93■□□□□ 0.46
GPC3P51654 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.93■□□□□ 0.46
GPC3P51654 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GPC3P51654 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 AL080243.2-201ENST00000418783 582 ntBASIC17.93■□□□□ 0.46
GPC3P51654 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 AC009477.1-201ENST00000452936 217 ntBASIC17.93■□□□□ 0.46
GPC3P51654 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.93■□□□□ 0.46
GPC3P51654 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.93■□□□□ 0.46
GPC3P51654 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.93■□□□□ 0.46
GPC3P51654 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.93■□□□□ 0.46
GPC3P51654 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 AC006449.5-201ENST00000610658 2098 ntBASIC17.93■□□□□ 0.46
GPC3P51654 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GPC3P51654 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.93■□□□□ 0.46
GPC3P51654 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.93■□□□□ 0.46
GPC3P51654 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.93■□□□□ 0.46
GPC3P51654 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.93■□□□□ 0.46
GPC3P51654 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
GPC3P51654 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.93■□□□□ 0.46
GPC3P51654 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 AC087499.5-201ENST00000452760 1342 ntBASIC17.93■□□□□ 0.46
GPC3P51654 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.93■□□□□ 0.46
GPC3P51654 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.93■□□□□ 0.46
GPC3P51654 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC3P51654 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
GPC3P51654 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.92■□□□□ 0.46
GPC3P51654 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.92■□□□□ 0.46
GPC3P51654 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
GPC3P51654 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.92■□□□□ 0.46
GPC3P51654 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.92■□□□□ 0.46
GPC3P51654 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.92■□□□□ 0.46
GPC3P51654 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.92■□□□□ 0.46
GPC3P51654 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.92■□□□□ 0.46
GPC3P51654 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.92■□□□□ 0.46
GPC3P51654 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 SERBP1P5-201ENST00000510079 1181 ntBASIC17.92■□□□□ 0.46
GPC3P51654 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.92■□□□□ 0.46
GPC3P51654 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
GPC3P51654 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.92■□□□□ 0.46
GPC3P51654 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
GPC3P51654 AL844908.2-201ENST00000609461 460 ntBASIC17.92■□□□□ 0.46
GPC3P51654 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.92■□□□□ 0.46
GPC3P51654 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
GPC3P51654 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.92■□□□□ 0.46
GPC3P51654 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.92■□□□□ 0.46
GPC3P51654 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms