Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 GPAA1P2-202ENST00000606848 1787 ntBASIC15.59■□□□□ 0.09
PRIM2P49643 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.59■□□□□ 0.09
PRIM2P49643 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.59■□□□□ 0.09
PRIM2P49643 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PRIM2P49643 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
PRIM2P49643 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.59■□□□□ 0.09
PRIM2P49643 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.59■□□□□ 0.09
PRIM2P49643 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.59■□□□□ 0.09
PRIM2P49643 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PRIM2P49643 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PRIM2P49643 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.59■□□□□ 0.09
PRIM2P49643 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.59■□□□□ 0.09
PRIM2P49643 POU5F1P6-201ENST00000466990 990 ntBASIC15.59■□□□□ 0.09
PRIM2P49643 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.59■□□□□ 0.09
PRIM2P49643 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
PRIM2P49643 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.59■□□□□ 0.09
PRIM2P49643 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.59■□□□□ 0.09
PRIM2P49643 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.59■□□□□ 0.09
PRIM2P49643 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.59■□□□□ 0.09
PRIM2P49643 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.59■□□□□ 0.09
PRIM2P49643 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
PRIM2P49643 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.59■□□□□ 0.09
PRIM2P49643 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
PRIM2P49643 AC116407.3-201ENST00000623905 1129 ntBASIC15.59■□□□□ 0.09
PRIM2P49643 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.59■□□□□ 0.09
PRIM2P49643 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.59■□□□□ 0.09
PRIM2P49643 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.59■□□□□ 0.09
PRIM2P49643 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.59■□□□□ 0.09
PRIM2P49643 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.59■□□□□ 0.09
PRIM2P49643 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRIM2P49643 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PRIM2P49643 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PRIM2P49643 AC099063.4-201ENST00000641099 1602 ntBASIC15.58■□□□□ 0.09
PRIM2P49643 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PRIM2P49643 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PRIM2P49643 CXCL1P1-201ENST00000502804 216 ntBASIC15.58■□□□□ 0.08
PRIM2P49643 RNA5SP419-201ENST00000515908 135 ntBASIC15.58■□□□□ 0.08
PRIM2P49643 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 OR7E47P-204ENST00000575924 449 ntBASIC15.58■□□□□ 0.08
PRIM2P49643 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.58■□□□□ 0.08
PRIM2P49643 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.58■□□□□ 0.08
PRIM2P49643 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.58■□□□□ 0.08
PRIM2P49643 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.58■□□□□ 0.08
PRIM2P49643 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.58■□□□□ 0.08
PRIM2P49643 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.58■□□□□ 0.08
PRIM2P49643 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.58■□□□□ 0.08
PRIM2P49643 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.58■□□□□ 0.08
PRIM2P49643 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PRIM2P49643 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.58■□□□□ 0.08
PRIM2P49643 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.58■□□□□ 0.08
PRIM2P49643 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PRIM2P49643 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 AC012569.1-201ENST00000591191 1524 ntBASIC15.58■□□□□ 0.08
PRIM2P49643 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PRIM2P49643 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.58■□□□□ 0.08
PRIM2P49643 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRIM2P49643 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms