Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC6A12P48065 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.69■□□□□ 0.1
SLC6A12P48065 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC6A12P48065 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC6A12P48065 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC6A12P48065 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC6A12P48065 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC6A12P48065 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC6A12P48065 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC6A12P48065 AC005829.1-201ENST00000570002 483 ntBASIC15.69■□□□□ 0.1
SLC6A12P48065 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
SLC6A12P48065 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC6A12P48065 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC6A12P48065 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC6A12P48065 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SLC6A12P48065 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.69■□□□□ 0.1
SLC6A12P48065 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC6A12P48065 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A12P48065 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC6A12P48065 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC6A12P48065 AC105917.1-201ENST00000506637 2539 ntBASIC15.68■□□□□ 0.1
SLC6A12P48065 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC6A12P48065 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC6A12P48065 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC6A12P48065 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC6A12P48065 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 CEND1P1-201ENST00000451006 455 ntBASIC15.68■□□□□ 0.1
SLC6A12P48065 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 IGHV3-62-201ENST00000520057 340 ntBASIC15.68■□□□□ 0.1
SLC6A12P48065 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC6A12P48065 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC6A12P48065 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.68■□□□□ 0.1
SLC6A12P48065 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC6A12P48065 AC022145.2-201ENST00000598203 171 ntBASIC15.68■□□□□ 0.1
SLC6A12P48065 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC6A12P48065 AC105339.1-204ENST00000636249 355 ntBASIC15.68■□□□□ 0.1
SLC6A12P48065 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC6A12P48065 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC6A12P48065 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC6A12P48065 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
SLC6A12P48065 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A12P48065 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SLC6A12P48065 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC6A12P48065 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SLC6A12P48065 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC6A12P48065 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A12P48065 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SLC6A12P48065 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SLC6A12P48065 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC6A12P48065 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A12P48065 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC6A12P48065 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms