Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NEDD4P46934 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.12■□□□□ 0.65
NEDD4P46934 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.12■□□□□ 0.65
NEDD4P46934 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 CYMP-203ENST00000474680 1263 ntBASIC19.12■□□□□ 0.65
NEDD4P46934 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.12■□□□□ 0.65
NEDD4P46934 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.12■□□□□ 0.65
NEDD4P46934 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.12■□□□□ 0.65
NEDD4P46934 DUX4L27-201ENST00000554796 1261 ntBASIC19.12■□□□□ 0.65
NEDD4P46934 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.12■□□□□ 0.65
NEDD4P46934 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.12■□□□□ 0.65
NEDD4P46934 SPDYE12P-201ENST00000618416 771 ntBASIC19.12■□□□□ 0.65
NEDD4P46934 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.12■□□□□ 0.65
NEDD4P46934 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NEDD4P46934 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.12■□□□□ 0.65
NEDD4P46934 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NEDD4P46934 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.11■□□□□ 0.65
NEDD4P46934 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NEDD4P46934 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.11■□□□□ 0.65
NEDD4P46934 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.11■□□□□ 0.65
NEDD4P46934 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.11■□□□□ 0.65
NEDD4P46934 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.11■□□□□ 0.65
NEDD4P46934 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
NEDD4P46934 AL390955.2-201ENST00000603032 514 ntBASIC19.11■□□□□ 0.65
NEDD4P46934 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.11■□□□□ 0.65
NEDD4P46934 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.11■□□□□ 0.65
NEDD4P46934 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.11■□□□□ 0.65
NEDD4P46934 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NEDD4P46934 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEDD4P46934 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.1■□□□□ 0.65
NEDD4P46934 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.1■□□□□ 0.65
NEDD4P46934 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NEDD4P46934 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NEDD4P46934 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
NEDD4P46934 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.1■□□□□ 0.65
NEDD4P46934 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.1■□□□□ 0.65
NEDD4P46934 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.1■□□□□ 0.65
NEDD4P46934 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.1■□□□□ 0.65
NEDD4P46934 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.1■□□□□ 0.65
NEDD4P46934 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
NEDD4P46934 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.1■□□□□ 0.65
NEDD4P46934 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 AC007950.2-201ENST00000615045 2347 ntBASIC19.1■□□□□ 0.65
NEDD4P46934 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NEDD4P46934 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEDD4P46934 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
NEDD4P46934 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
NEDD4P46934 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.09■□□□□ 0.65
NEDD4P46934 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.09■□□□□ 0.65
NEDD4P46934 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NEDD4P46934 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEDD4P46934 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms