Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CMTM6-203ENST00000495177 670 ntTSL 216.73■□□□□ 0.271e-7■■□□□ 12.8
RPS3P23396 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.071e-7■■□□□ 12.8
RPS3P23396 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.071e-7■■□□□ 12.8
RPS3P23396 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.24□□□□□ -0.131e-7■■□□□ 12.8
RPS3P23396 DERL2-212ENST00000575605 551 ntTSL 414.24□□□□□ -0.131e-7■■□□□ 12.8
RPS3P23396 DERL2-207ENST00000573547 701 ntTSL 212.66□□□□□ -0.381e-7■■□□□ 12.8
RPS3P23396 LEMD2-209ENST00000511171 4870 ntTSL 212.35□□□□□ -0.431e-7■■□□□ 12.8
RPS3P23396 LEMD2-207ENST00000508327 1306 ntTSL 2 BASIC12.04□□□□□ -0.481e-7■■□□□ 12.8
RPS3P23396 LEMD2-204ENST00000502643 583 ntTSL 411.51□□□□□ -0.571e-7■■□□□ 12.8
RPS3P23396 DERL2-206ENST00000572834 589 ntTSL 3 BASIC10.6□□□□□ -0.711e-7■■□□□ 12.8
RPS3P23396 DERL2-201ENST00000158771 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.781e-7■■□□□ 12.8
RPS3P23396 LEMD2-212ENST00000513832 821 ntTSL 48.48□□□□□ -1.051e-7■■□□□ 12.8
RPS3P23396 LEMD2-208ENST00000510598 563 ntTSL 1 (best)8.46□□□□□ -1.061e-7■■□□□ 12.8
RPS3P23396 LEMD2-211ENST00000513701 555 ntTSL 48.36□□□□□ -1.071e-7■■□□□ 12.8
RPS3P23396 LEMD2-210ENST00000512368 544 ntTSL 47.01□□□□□ -1.291e-7■■□□□ 12.8
RPS3P23396 DERL2-203ENST00000571476 570 ntTSL 34.67□□□□□ -1.661e-7■■□□□ 12.8
RPS3P23396 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.25□□□□□ -2.055e-7■■□□□ 12.8
RPS3P23396 HERPUD1-205ENST00000562914 570 ntTSL 214.97□□□□□ -0.014e-7■■□□□ 12.8
RPS3P23396 HERPUD1-215ENST00000568676 571 ntTSL 214.97□□□□□ -0.014e-7■■□□□ 12.8
RPS3P23396 HERPUD1-218ENST00000569569 1125 ntTSL 213.47□□□□□ -0.254e-7■■□□□ 12.8
RPS3P23396 FN1-213ENST00000456923 3720 ntTSL 26.61□□□□□ -1.356e-50■■□□□ 12.8
RPS3P23396 FN1-224ENST00000492816 9171 ntTSL 55.32□□□□□ -1.566e-50■■□□□ 12.8
RPS3P23396 GGCX-204ENST00000428479 533 ntTSL 412.07□□□□□ -0.485e-7■■□□□ 12.8
RPS3P23396 GGCX-202ENST00000421496 540 ntTSL 410.99□□□□□ -0.655e-7■■□□□ 12.8
RPS3P23396 GGCX-203ENST00000423570 1339 ntTSL 1 (best)10.46□□□□□ -0.735e-7■■□□□ 12.8
RPS3P23396 SSBP1-210ENST00000481508 989 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.754e-7■■□□□ 12.8
RPS3P23396 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.684e-7■■□□□ 12.8
RPS3P23396 ERGIC3-211ENST00000461043 728 ntTSL 211.89□□□□□ -0.514e-7■■□□□ 12.8
RPS3P23396 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.321e-10■■□□□ 12.8
RPS3P23396 MARS-212ENST00000548630 557 ntTSL 216■□□□□ 0.153e-7■■□□□ 12.8
RPS3P23396 MARS-206ENST00000546971 711 ntTSL 215.75■□□□□ 0.113e-7■■□□□ 12.8
RPS3P23396 PLPP3-203ENST00000461655 646 ntTSL 35.07□□□□□ -1.63e-11■■□□□ 12.8
RPS3P23396 CANX-206ENST00000503126 592 ntTSL 51.18□□□□□ -2.224e-13■■□□□ 12.8
RPS3P23396 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC9.26□□□□□ -0.935e-8■■□□□ 12.8
RPS3P23396 ACTG1-207ENST00000574671 1678 ntTSL 1 (best)12.4□□□□□ -0.426e-25■■□□□ 12.8
RPS3P23396 FBLN1-209ENST00000445110 512 ntTSL 418.89■□□□□ 0.611e-13■■□□□ 12.8
RPS3P23396 CTNNA1-223ENST00000520520 484 ntTSL 38.41□□□□□ -1.064e-8■■□□□ 12.8
RPS3P23396 MPP1-215ENST00000488754 553 ntTSL 38.17□□□□□ -1.13e-18■■□□□ 12.8
RPS3P23396 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.27■□□□□ 0.841e-9■■□□□ 12.8
RPS3P23396 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.81e-9■■□□□ 12.8
RPS3P23396 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.38□□□□□ -0.271e-9■■□□□ 12.8
RPS3P23396 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.959e-9■■□□□ 12.8
RPS3P23396 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.419e-9■■□□□ 12.8
RPS3P23396 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.7□□□□□ -0.069e-9■■□□□ 12.8
RPS3P23396 RPL8-208ENST00000529163 556 ntTSL 211.15□□□□□ -0.629e-9■■□□□ 12.8
RPS3P23396 DDX5-221ENST00000582326 585 ntTSL 23.83□□□□□ -1.86e-14■■□□□ 12.8
RPS3P23396 DDX5-222ENST00000583201 556 ntTSL 22.97□□□□□ -1.936e-14■■□□□ 12.8
RPS3P23396 DDX5-217ENST00000581551 573 ntTSL 20.89□□□□□ -2.276e-14■■□□□ 12.8
RPS3P23396 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.62■□□□□ 0.252e-6■■□□□ 12.8
RPS3P23396 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.122e-6■■□□□ 12.8
RPS3P23396 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.62■□□□□ 0.092e-6■■□□□ 12.8
RPS3P23396 RPRD1B-203ENST00000462548 2436 ntTSL 514.87□□□□□ -0.032e-6■■□□□ 12.8
RPS3P23396 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.07□□□□□ -0.162e-6■■□□□ 12.8
RPS3P23396 CDIP1-203ENST00000562579 577 ntTSL 513.94□□□□□ -0.182e-6■■□□□ 12.8
RPS3P23396 RPRD1B-201ENST00000373433 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.72e-6■■□□□ 12.8
RPS3P23396 DCXR-205ENST00000577996 98 ntTSL 3-1.73□□□□□ -2.692e-10■■□□□ 12.8
RPS3P23396 DDX5-207ENST00000578400 575 ntTSL 513.57□□□□□ -0.243e-14■■□□□ 12.8
RPS3P23396 DDX5-220ENST00000581806 576 ntTSL 415.84■□□□□ 0.135e-24■■□□□ 12.8
RPS3P23396 RPL18-213ENST00000552347 1645 ntTSL 517.62■□□□□ 0.414e-9■■□□□ 12.8
RPS3P23396 RPL18-212ENST00000551749 2091 ntTSL 217.19■□□□□ 0.344e-9■■□□□ 12.8
RPS3P23396 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.244e-9■■□□□ 12.8
RPS3P23396 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.52■□□□□ 0.244e-9■■□□□ 12.8
RPS3P23396 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.52■□□□□ 0.244e-9■■□□□ 12.8
RPS3P23396 RPL18-206ENST00000549370 628 ntTSL 515.8■□□□□ 0.124e-9■■□□□ 12.8
RPS3P23396 RPL18-204ENST00000547897 440 ntTSL 513.77□□□□□ -0.214e-9■■□□□ 12.8
RPS3P23396 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC12.45□□□□□ -0.424e-9■■□□□ 12.8
RPS3P23396 RPL18-203ENST00000547892 3844 nt11.62□□□□□ -0.554e-9■■□□□ 12.8
RPS3P23396 EPRS-204ENST00000477030 1526 ntTSL 1 (best)19.85■□□□□ 0.772e-7■■□□□ 12.8
RPS3P23396 FN1-217ENST00000471193 496 ntTSL 311.5□□□□□ -0.574e-79■■□□□ 12.8
RPS3P23396 EIF3G-208ENST00000589454 873 ntTSL 510.06□□□□□ -0.82e-8■■□□□ 12.8
RPS3P23396 GTF2I-213ENST00000613513 538 ntTSL 418.96■□□□□ 0.634e-7■■□□□ 12.8
RPS3P23396 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.124e-7■■□□□ 12.8
RPS3P23396 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.254e-7■■□□□ 12.8
RPS3P23396 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.254e-7■■□□□ 12.8
RPS3P23396 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.524e-7■■□□□ 12.8
RPS3P23396 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC10.53□□□□□ -0.724e-7■■□□□ 12.8
RPS3P23396 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.972e-6■■□□□ 12.8
RPS3P23396 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.912e-6■■□□□ 12.8
RPS3P23396 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.912e-6■■□□□ 12.8
RPS3P23396 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.76■□□□□ 0.592e-6■■□□□ 12.8
RPS3P23396 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.76■□□□□ 0.272e-6■■□□□ 12.8
RPS3P23396 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.67■□□□□ 0.262e-6■■□□□ 12.8
RPS3P23396 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.92■□□□□ 0.142e-6■■□□□ 12.8
RPS3P23396 NDUFB2-211ENST00000476181 660 ntTSL 1 (best)14.46□□□□□ -0.092e-6■■□□□ 12.8
RPS3P23396 NDUFB2-205ENST00000464564 469 ntTSL 514.2□□□□□ -0.142e-6■■□□□ 12.8
RPS3P23396 NDUFB2-206ENST00000464566 726 ntTSL 310.98□□□□□ -0.652e-6■■□□□ 12.8
RPS3P23396 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.14□□□□□ -1.272e-6■■□□□ 12.8
RPS3P23396 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.43□□□□□ -1.542e-6■■□□□ 12.8
RPS3P23396 NDUFB2-214ENST00000479181 665 ntTSL 25.15□□□□□ -1.592e-6■■□□□ 12.8
RPS3P23396 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.88□□□□□ -1.632e-6■■□□□ 12.8
RPS3P23396 RPL10A-204ENST00000478340 962 ntTSL 217.48■□□□□ 0.395e-16■■□□□ 12.7
RPS3P23396 RPL10A-205ENST00000490335 632 ntTSL 215.72■□□□□ 0.115e-16■■□□□ 12.7
RPS3P23396 RPL10A-203ENST00000467020 1069 ntTSL 314.62□□□□□ -0.075e-16■■□□□ 12.7
RPS3P23396 RPL10A-202ENST00000464112 1063 ntTSL 1 (best)12.47□□□□□ -0.415e-16■■□□□ 12.7
RPS3P23396 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.585e-16■■□□□ 12.7
RPS3P23396 SSR3-202ENST00000463503 596 ntTSL 4 BASIC10.79□□□□□ -0.686e-11■■□□□ 12.7
RPS3P23396 SSR3-207ENST00000478842 612 ntTSL 34.97□□□□□ -1.611e-14■■□□□ 12.7
RPS3P23396 SSR3-203ENST00000464138 533 ntTSL 34.87□□□□□ -1.631e-14■■□□□ 12.7
RPS3P23396 SSR3-209ENST00000498205 593 ntTSL 24.23□□□□□ -1.731e-14■■□□□ 12.7
RPS3P23396 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.36□□□□□ -2.196e-11■■□□□ 12.7
Retrieved 100 of 24,271 protein–RNA pairs in 165.1 ms