RNA–Protein interactions for RNA: ENST00000512368.5

LEMD2-210, Transcript of LEM domain containing 2, humanhuman

TSL 4

Gene LEMD2, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-210ENST00000512368 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
LEMD2-210ENST00000512368 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
LEMD2-210ENST00000512368 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
LEMD2-210ENST00000512368 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
LEMD2-210ENST00000512368 NISCHQ9Y2I1 1504 aa16.27■□□□□ 0.2
LEMD2-210ENST00000512368 FOXD1Q16676 465 aa16■□□□□ 0.15
LEMD2-210ENST00000512368 PLPPR3Q6T4P5 718 aa15.91■□□□□ 0.14
LEMD2-210ENST00000512368 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
LEMD2-210ENST00000512368 MSH5O43196 834 aa15.25■□□□□ 0.03
LEMD2-210ENST00000512368 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
LEMD2-210ENST00000512368 ADRA2BP18089 450 aa14.88□□□□□ -0.03
LEMD2-210ENST00000512368 PIAS4Q8N2W9 510 aaPredicted RBP14.83□□□□□ -0.04
LEMD2-210ENST00000512368 KCNA4P22459 653 aa14.26□□□□□ -0.13
LEMD2-210ENST00000512368 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
LEMD2-210ENST00000512368 PPP4R3CPQ6ZMV5 832 aa14.06□□□□□ -0.16
LEMD2-210ENST00000512368 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
LEMD2-210ENST00000512368 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
LEMD2-210ENST00000512368 ABCC9O60706 1549 aa13.74□□□□□ -0.21
LEMD2-210ENST00000512368 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
LEMD2-210ENST00000512368 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
LEMD2-210ENST00000512368 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
LEMD2-210ENST00000512368 NPM3O75607 178 aaKnown RBP13.63□□□□□ -0.23
LEMD2-210ENST00000512368 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
LEMD2-210ENST00000512368 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
LEMD2-210ENST00000512368 DMRT2Q9Y5R5 561 aa13.5□□□□□ -0.25
LEMD2-210ENST00000512368 DCAF1Q9Y4B6 1507 aa13.48□□□□□ -0.25
LEMD2-210ENST00000512368 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
LEMD2-210ENST00000512368 MYO15BQ96JP2 1530 aa13.44□□□□□ -0.26
LEMD2-210ENST00000512368 NACADO15069 1562 aa13.41□□□□□ -0.26
LEMD2-210ENST00000512368 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
LEMD2-210ENST00000512368 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
LEMD2-210ENST00000512368 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
LEMD2-210ENST00000512368 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
LEMD2-210ENST00000512368 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
LEMD2-210ENST00000512368 ZBTB22O15209 634 aa13.14□□□□□ -0.31
LEMD2-210ENST00000512368 SHROOM4Q9ULL8 1493 aa13.1□□□□□ -0.31
LEMD2-210ENST00000512368 HOXD11P31277 338 aaPredicted RBP13.05□□□□□ -0.32
LEMD2-210ENST00000512368 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
LEMD2-210ENST00000512368 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
LEMD2-210ENST00000512368 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
LEMD2-210ENST00000512368 RNF39Q9H2S5 420 aa12.94□□□□□ -0.34
LEMD2-210ENST00000512368 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
LEMD2-210ENST00000512368 BICRAQ9NZM4 1560 aa12.81□□□□□ -0.36
LEMD2-210ENST00000512368 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
LEMD2-210ENST00000512368 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
LEMD2-210ENST00000512368 C1QBPQ07021 282 aaKnown RBP12.73□□□□□ -0.37
LEMD2-210ENST00000512368 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
LEMD2-210ENST00000512368 BAZ1AQ9NRL2 1556 aaPredicted RBP12.6□□□□□ -0.39
LEMD2-210ENST00000512368 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
LEMD2-210ENST00000512368 SUPT5HO00267 1087 aaKnown RBP12.57□□□□□ -0.4
LEMD2-210ENST00000512368 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
LEMD2-210ENST00000512368 RSF1Q96T23 1441 aaPredicted RBP12.54□□□□□ -0.4
LEMD2-210ENST00000512368 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.41
LEMD2-210ENST00000512368 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
LEMD2-210ENST00000512368 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
LEMD2-210ENST00000512368 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
LEMD2-210ENST00000512368 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
LEMD2-210ENST00000512368 NCAPD3P42695 1498 aa12.4□□□□□ -0.43
LEMD2-210ENST00000512368 PEG3Q9GZU2 1588 aa12.39□□□□□ -0.43
LEMD2-210ENST00000512368 BAZ1BQ9UIG0 1483 aaKnown RBP12.37□□□□□ -0.43
LEMD2-210ENST00000512368 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
LEMD2-210ENST00000512368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.36□□□□□ -0.43
LEMD2-210ENST00000512368 WIZO95785 1651 aa12.34□□□□□ -0.43
LEMD2-210ENST00000512368 HMGXB3Q12766 1538 aa12.31□□□□□ -0.44
LEMD2-210ENST00000512368 TOP2AP11388 1531 aaKnown RBP12.29□□□□□ -0.44
LEMD2-210ENST00000512368 POTEHQ6S545 545 aa12.29□□□□□ -0.44
LEMD2-210ENST00000512368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.27□□□□□ -0.45
LEMD2-210ENST00000512368 HNRNPUL2Q1KMD3 747 aaKnown RBP12.27□□□□□ -0.45
LEMD2-210ENST00000512368 U3KPZ7 1027 aaPredicted RBP12.25□□□□□ -0.45
LEMD2-210ENST00000512368 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
LEMD2-210ENST00000512368 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
LEMD2-210ENST00000512368 CCDC88BA6NC98 1476 aa12.18□□□□□ -0.46
LEMD2-210ENST00000512368 CADPSQ9ULU8 1353 aa12.09□□□□□ -0.47
LEMD2-210ENST00000512368 FKBP8Q14318 412 aa12.09□□□□□ -0.47
LEMD2-210ENST00000512368 CFTRP13569 1480 aa12.04□□□□□ -0.48
LEMD2-210ENST00000512368 APLP2Q06481 763 aa12.02□□□□□ -0.49
LEMD2-210ENST00000512368 PDS5BQ9NTI5 1447 aa12□□□□□ -0.49
LEMD2-210ENST00000512368 LAMC3Q9Y6N6 1575 aa11.98□□□□□ -0.49
LEMD2-210ENST00000512368 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
LEMD2-210ENST00000512368 NESP48681 1621 aa11.93□□□□□ -0.5
LEMD2-210ENST00000512368 FANCD2Q9BXW9 1451 aa11.91□□□□□ -0.5
LEMD2-210ENST00000512368 DSG3P32926 999 aa11.91□□□□□ -0.5
LEMD2-210ENST00000512368 TRIM41Q8WV44 630 aa11.9□□□□□ -0.5
LEMD2-210ENST00000512368 AMER1Q5JTC6 1135 aaPredicted RBP11.88□□□□□ -0.51
LEMD2-210ENST00000512368 ERCC6Q03468 1493 aa11.88□□□□□ -0.51
LEMD2-210ENST00000512368 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
LEMD2-210ENST00000512368 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
LEMD2-210ENST00000512368 WRNQ14191 1432 aaPredicted RBP eCLIP11.85□□□□□ -0.51
LEMD2-210ENST00000512368 CAPN15O75808 1086 aa11.83□□□□□ -0.52
LEMD2-210ENST00000512368 ABCC8Q09428 1581 aa11.83□□□□□ -0.52
LEMD2-210ENST00000512368 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
LEMD2-210ENST00000512368 MRC2Q9UBG0 1479 aa11.77□□□□□ -0.52
LEMD2-210ENST00000512368 PRDM2Q13029 1718 aa11.76□□□□□ -0.53
LEMD2-210ENST00000512368 TOPBP1Q92547 1522 aa11.72□□□□□ -0.53
LEMD2-210ENST00000512368 MKRN4PQ13434 485 aaPredicted RBP11.72□□□□□ -0.53
LEMD2-210ENST00000512368 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.53
LEMD2-210ENST00000512368 CUX1P39880 1505 aa11.71□□□□□ -0.53
LEMD2-210ENST00000512368 URB2Q14146 1524 aaKnown RBP11.71□□□□□ -0.53
LEMD2-210ENST00000512368 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
LEMD2-210ENST00000512368 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms