Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHRNB2P17787 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CHRNB2P17787 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHRNB2P17787 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNB2P17787 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNB2P17787 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CHRNB2P17787 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CHRNB2P17787 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.24■□□□□ 0.35
CHRNB2P17787 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CHRNB2P17787 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.24■□□□□ 0.35
CHRNB2P17787 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.24■□□□□ 0.35
CHRNB2P17787 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNB2P17787 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHRNB2P17787 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNB2P17787 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.24■□□□□ 0.35
CHRNB2P17787 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.24■□□□□ 0.35
CHRNB2P17787 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNB2P17787 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNB2P17787 SPCS2P4-201ENST00000436160 681 ntBASIC17.24■□□□□ 0.35
CHRNB2P17787 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CHRNB2P17787 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNB2P17787 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNB2P17787 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNB2P17787 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNB2P17787 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHRNB2P17787 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHRNB2P17787 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHRNB2P17787 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHRNB2P17787 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CHRNB2P17787 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNB2P17787 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CHRNB2P17787 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNB2P17787 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHRNB2P17787 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHRNB2P17787 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNB2P17787 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNB2P17787 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 MIR346-201ENST00000362234 95 ntBASIC17.23■□□□□ 0.35
CHRNB2P17787 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNB2P17787 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNB2P17787 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNB2P17787 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNB2P17787 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNB2P17787 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNB2P17787 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CHRNB2P17787 ALG1L5P-201ENST00000482043 771 ntBASIC17.23■□□□□ 0.35
CHRNB2P17787 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNB2P17787 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNB2P17787 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CHRNB2P17787 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.23■□□□□ 0.35
CHRNB2P17787 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNB2P17787 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNB2P17787 C20orf181-201ENST00000623918 480 ntBASIC17.23■□□□□ 0.35
CHRNB2P17787 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNB2P17787 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNB2P17787 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CHRNB2P17787 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CHRNB2P17787 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CHRNB2P17787 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CHRNB2P17787 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNB2P17787 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNB2P17787 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms