Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.53□□□□□ -0.08
ERCC1P07992 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ERCC1P07992 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.53□□□□□ -0.08
ERCC1P07992 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ERCC1P07992 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ERCC1P07992 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.53□□□□□ -0.08
ERCC1P07992 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.53□□□□□ -0.08
ERCC1P07992 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.53□□□□□ -0.08
ERCC1P07992 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.53□□□□□ -0.08
ERCC1P07992 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.53□□□□□ -0.08
ERCC1P07992 AC018845.2-201ENST00000568326 409 ntBASIC14.53□□□□□ -0.08
ERCC1P07992 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.53□□□□□ -0.08
ERCC1P07992 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.53□□□□□ -0.08
ERCC1P07992 C20orf181-201ENST00000623918 480 ntBASIC14.53□□□□□ -0.08
ERCC1P07992 AC004877.2-201ENST00000623941 599 ntBASIC14.53□□□□□ -0.08
ERCC1P07992 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.53□□□□□ -0.08
ERCC1P07992 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.53□□□□□ -0.08
ERCC1P07992 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ERCC1P07992 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC1P07992 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ERCC1P07992 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.53□□□□□ -0.08
ERCC1P07992 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.52□□□□□ -0.08
ERCC1P07992 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.52□□□□□ -0.08
ERCC1P07992 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
ERCC1P07992 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.52□□□□□ -0.08
ERCC1P07992 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.52□□□□□ -0.08
ERCC1P07992 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 TOP3BP1-201ENST00000420768 1380 ntBASIC14.52□□□□□ -0.08
ERCC1P07992 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.52□□□□□ -0.08
ERCC1P07992 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.52□□□□□ -0.08
ERCC1P07992 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ERCC1P07992 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
ERCC1P07992 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.52□□□□□ -0.09
ERCC1P07992 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ERCC1P07992 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
ERCC1P07992 MKNK2P1-201ENST00000437526 628 ntBASIC14.52□□□□□ -0.09
ERCC1P07992 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.52□□□□□ -0.09
ERCC1P07992 AL513480.1-201ENST00000451731 511 ntBASIC14.52□□□□□ -0.09
ERCC1P07992 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.52□□□□□ -0.09
ERCC1P07992 AC112482.1-201ENST00000492080 688 ntBASIC14.52□□□□□ -0.09
ERCC1P07992 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
ERCC1P07992 PDPK2P-202ENST00000562415 1191 ntBASIC14.52□□□□□ -0.09
ERCC1P07992 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.52□□□□□ -0.09
ERCC1P07992 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.52□□□□□ -0.09
ERCC1P07992 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ERCC1P07992 AC010507.1-201ENST00000633895 436 ntBASIC14.52□□□□□ -0.09
ERCC1P07992 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ERCC1P07992 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ERCC1P07992 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ERCC1P07992 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ERCC1P07992 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.52□□□□□ -0.09
ERCC1P07992 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
ERCC1P07992 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ERCC1P07992 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ERCC1P07992 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.52□□□□□ -0.09
ERCC1P07992 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ERCC1P07992 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ERCC1P07992 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ERCC1P07992 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ERCC1P07992 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.51□□□□□ -0.09
ERCC1P07992 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ERCC1P07992 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC1P07992 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
ERCC1P07992 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.51□□□□□ -0.09
ERCC1P07992 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC1P07992 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.51□□□□□ -0.09
ERCC1P07992 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ERCC1P07992 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ERCC1P07992 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC1P07992 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.51□□□□□ -0.09
ERCC1P07992 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC1P07992 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC1P07992 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC1P07992 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.51□□□□□ -0.09
ERCC1P07992 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ERCC1P07992 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC1P07992 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC1P07992 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC1P07992 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC1P07992 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms