Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
APOC3P02656 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
APOC3P02656 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 GUSBP5-201ENST00000418136 578 ntBASIC13.11□□□□□ -0.31
APOC3P02656 AC123595.1-201ENST00000440769 1046 ntBASIC13.11□□□□□ -0.31
APOC3P02656 AC093787.1-201ENST00000450396 207 ntBASIC13.11□□□□□ -0.31
APOC3P02656 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC3P02656 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.11□□□□□ -0.31
APOC3P02656 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC3P02656 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC3P02656 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.11□□□□□ -0.31
APOC3P02656 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
APOC3P02656 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
APOC3P02656 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC3P02656 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC3P02656 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
APOC3P02656 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
APOC3P02656 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOC3P02656 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC3P02656 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC3P02656 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOC3P02656 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOC3P02656 LINC00895-201ENST00000629028 1637 ntBASIC13.1□□□□□ -0.31
APOC3P02656 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
APOC3P02656 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
APOC3P02656 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
APOC3P02656 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 AL512625.2-201ENST00000417533 625 ntBASIC13.1□□□□□ -0.31
APOC3P02656 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 RARRES2P1-201ENST00000474487 481 ntBASIC13.1□□□□□ -0.31
APOC3P02656 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
APOC3P02656 AC004264.1-201ENST00000608354 794 ntBASIC13.1□□□□□ -0.31
APOC3P02656 AC131212.4-201ENST00000623606 975 ntBASIC13.1□□□□□ -0.31
APOC3P02656 AL136967.2-201ENST00000623968 743 ntBASIC13.1□□□□□ -0.31
APOC3P02656 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.1□□□□□ -0.31
APOC3P02656 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
APOC3P02656 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.1□□□□□ -0.31
APOC3P02656 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOC3P02656 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC3P02656 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC3P02656 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.09□□□□□ -0.31
APOC3P02656 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.09□□□□□ -0.31
APOC3P02656 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.09□□□□□ -0.31
APOC3P02656 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC3P02656 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms