Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
MT-CO1P00395 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.73■□□□□ 0.27
MT-CO1P00395 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-CO1P00395 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-CO1P00395 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-CO1P00395 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
MT-CO1P00395 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.73■□□□□ 0.27
MT-CO1P00395 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.73■□□□□ 0.27
MT-CO1P00395 AC069262.1-201ENST00000539058 672 ntBASIC16.73■□□□□ 0.27
MT-CO1P00395 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-CO1P00395 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-CO1P00395 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-CO1P00395 PCGF3-213ENST00000620529 1899 ntBASIC16.73■□□□□ 0.27
MT-CO1P00395 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.73■□□□□ 0.27
MT-CO1P00395 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-CO1P00395 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MT-CO1P00395 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-CO1P00395 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
MT-CO1P00395 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MT-CO1P00395 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.72■□□□□ 0.27
MT-CO1P00395 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-CO1P00395 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-CO1P00395 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
MT-CO1P00395 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MT-CO1P00395 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
MT-CO1P00395 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-CO1P00395 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-CO1P00395 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MT-CO1P00395 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.72■□□□□ 0.27
MT-CO1P00395 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-CO1P00395 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.72■□□□□ 0.27
MT-CO1P00395 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.72■□□□□ 0.27
MT-CO1P00395 AC093724.1-201ENST00000448659 1027 ntBASIC16.72■□□□□ 0.27
MT-CO1P00395 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-CO1P00395 SPTSSB-204ENST00000617024 1292 ntBASIC16.72■□□□□ 0.27
MT-CO1P00395 AC093512.1-201ENST00000617969 520 ntBASIC16.72■□□□□ 0.27
MT-CO1P00395 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
MT-CO1P00395 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.72■□□□□ 0.27
MT-CO1P00395 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MT-CO1P00395 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 ALOX12P2-203ENST00000570921 1945 ntBASIC16.72■□□□□ 0.27
MT-CO1P00395 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MT-CO1P00395 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-CO1P00395 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-CO1P00395 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-CO1P00395 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-CO1P00395 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MT-CO1P00395 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MT-CO1P00395 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MT-CO1P00395 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
MT-CO1P00395 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MT-CO1P00395 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-CO1P00395 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-CO1P00395 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-CO1P00395 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MT-CO1P00395 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MT-CO1P00395 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.71■□□□□ 0.27
MT-CO1P00395 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MT-CO1P00395 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.71■□□□□ 0.27
MT-CO1P00395 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.71■□□□□ 0.27
MT-CO1P00395 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.71■□□□□ 0.27
MT-CO1P00395 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.71■□□□□ 0.27
MT-CO1P00395 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms