Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.07■□□□□ 0.32
TRUB2O95900 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.07■□□□□ 0.32
TRUB2O95900 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.07■□□□□ 0.32
TRUB2O95900 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.07■□□□□ 0.32
TRUB2O95900 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.07■□□□□ 0.32
TRUB2O95900 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TRUB2O95900 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.07■□□□□ 0.32
TRUB2O95900 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.07■□□□□ 0.32
TRUB2O95900 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.07■□□□□ 0.32
TRUB2O95900 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.07■□□□□ 0.32
TRUB2O95900 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.07■□□□□ 0.32
TRUB2O95900 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
TRUB2O95900 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 AL589702.1-201ENST00000641229 1509 ntBASIC17.06■□□□□ 0.32
TRUB2O95900 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.06■□□□□ 0.32
TRUB2O95900 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRUB2O95900 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRUB2O95900 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.06■□□□□ 0.32
TRUB2O95900 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
TRUB2O95900 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.06■□□□□ 0.32
TRUB2O95900 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRUB2O95900 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRUB2O95900 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
TRUB2O95900 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRUB2O95900 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.06■□□□□ 0.32
TRUB2O95900 GPS2P2-201ENST00000430745 888 ntBASIC17.06■□□□□ 0.32
TRUB2O95900 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.06■□□□□ 0.32
TRUB2O95900 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.06■□□□□ 0.32
TRUB2O95900 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.06■□□□□ 0.32
TRUB2O95900 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.06■□□□□ 0.32
TRUB2O95900 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.06■□□□□ 0.32
TRUB2O95900 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRUB2O95900 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRUB2O95900 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.06■□□□□ 0.32
TRUB2O95900 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRUB2O95900 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.05■□□□□ 0.32
TRUB2O95900 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.05■□□□□ 0.32
TRUB2O95900 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.05■□□□□ 0.32
TRUB2O95900 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.05■□□□□ 0.32
TRUB2O95900 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.05■□□□□ 0.32
TRUB2O95900 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.05■□□□□ 0.32
TRUB2O95900 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.05■□□□□ 0.32
TRUB2O95900 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.05■□□□□ 0.32
TRUB2O95900 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
TRUB2O95900 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.05■□□□□ 0.32
TRUB2O95900 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
TRUB2O95900 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 AC008894.3-201ENST00000624324 3103 ntBASIC17.05■□□□□ 0.32
TRUB2O95900 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.05■□□□□ 0.32
TRUB2O95900 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRUB2O95900 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRUB2O95900 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms