Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLIC1O00299 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLIC1O00299 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLIC1O00299 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
CLIC1O00299 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.4■□□□□ 0.06
CLIC1O00299 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.4■□□□□ 0.06
CLIC1O00299 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.4■□□□□ 0.06
CLIC1O00299 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CLIC1O00299 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.4■□□□□ 0.06
CLIC1O00299 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.4■□□□□ 0.06
CLIC1O00299 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CLIC1O00299 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.4■□□□□ 0.06
CLIC1O00299 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.4■□□□□ 0.06
CLIC1O00299 AF186996.4-201ENST00000467186 377 ntBASIC15.4■□□□□ 0.06
CLIC1O00299 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.4■□□□□ 0.06
CLIC1O00299 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CLIC1O00299 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.4■□□□□ 0.06
CLIC1O00299 AL031432.2-201ENST00000566714 459 ntBASIC15.4■□□□□ 0.06
CLIC1O00299 AL928711.1-201ENST00000570165 459 ntBASIC15.4■□□□□ 0.06
CLIC1O00299 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.4■□□□□ 0.06
CLIC1O00299 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.4■□□□□ 0.06
CLIC1O00299 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CLIC1O00299 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.4■□□□□ 0.06
CLIC1O00299 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.4■□□□□ 0.06
CLIC1O00299 AL645728.2-201ENST00000641974 660 ntBASIC15.4■□□□□ 0.06
CLIC1O00299 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.4■□□□□ 0.06
CLIC1O00299 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.4■□□□□ 0.06
CLIC1O00299 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.4■□□□□ 0.06
CLIC1O00299 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLIC1O00299 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.4■□□□□ 0.06
CLIC1O00299 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLIC1O00299 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.39■□□□□ 0.05
CLIC1O00299 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.39■□□□□ 0.05
CLIC1O00299 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CLIC1O00299 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.39■□□□□ 0.05
CLIC1O00299 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 AL513480.1-201ENST00000451731 511 ntBASIC15.39■□□□□ 0.05
CLIC1O00299 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.39■□□□□ 0.05
CLIC1O00299 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.39■□□□□ 0.05
CLIC1O00299 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.39■□□□□ 0.05
CLIC1O00299 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.39■□□□□ 0.05
CLIC1O00299 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.39■□□□□ 0.05
CLIC1O00299 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 AC008677.1-201ENST00000519230 1561 ntBASIC15.39■□□□□ 0.05
CLIC1O00299 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLIC1O00299 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.39■□□□□ 0.05
CLIC1O00299 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CLIC1O00299 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.39■□□□□ 0.05
CLIC1O00299 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.39■□□□□ 0.05
CLIC1O00299 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLIC1O00299 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms