Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.19■□□□□ 0.02
C1QTNF9BB2RNN3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 SOCS2P1-201ENST00000417727 557 ntBASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 MIR4741-201ENST00000579822 90 ntBASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 EEF1DP1-201ENST00000585891 896 ntBASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 BRI3BPP1-201ENST00000594224 787 ntBASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF9BB2RNN3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AC234644.1-201ENST00000406065 370 ntBASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AC012441.1-201ENST00000446669 685 ntBASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 FTLP1-201ENST00000449155 526 ntBASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AL139010.1-201ENST00000454878 894 ntBASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 FAM86LP-201ENST00000478302 853 ntBASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AC245884.6-201ENST00000515672 1067 ntBASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AC009486.1-201ENST00000569860 813 ntBASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AC104982.3-201ENST00000581995 514 ntBASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AC091812.3-201ENST00000621362 345 ntBASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 AC067852.2-201ENST00000590513 2313 ntBASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF9BB2RNN3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms