Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 LINC00552-201ENST00000625151 2579 ntBASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 HCG4-201ENST00000418983 998 ntBASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 DRAXINP1-201ENST00000437611 948 ntBASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 AL160237.2-201ENST00000556165 472 ntBASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 AGAP7P-201ENST00000582299 2062 ntBASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 AGAP14-201ENST00000624701 2060 ntBASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV3S1A0A5B6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 TPSP2-201ENST00000561760 610 ntBASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 AC005412.3-201ENST00000580309 715 ntBASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 AL589182.2-201ENST00000619332 1049 ntBASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 AL022326.1-202ENST00000641533 845 ntBASIC15.27■□□□□ 0.04
TCRBV3S1A0A5B6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.27■□□□□ 0.03
TCRBV3S1A0A5B6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms