Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
AP4B1Q9Y6B7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 GGT4P-201ENST00000623672 1708 ntBASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 BX005266.1-201ENST00000473402 457 ntBASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 AC021087.4-201ENST00000563761 564 ntBASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 MTDHP4-201ENST00000600287 670 ntBASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 AL773604.1-201ENST00000617417 272 ntBASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 AC006449.6-201ENST00000612330 2296 ntBASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4B1Q9Y6B7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms