Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 IER3-202ENST00000376377 1350 ntBASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 ARMC10P1-201ENST00000313754 855 ntBASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UBE2D4Q9Y2X8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
UBE2D4Q9Y2X8 U82695.1-201ENST00000635752 1889 ntBASIC11.4□□□□□ -0.59
UBE2D4Q9Y2X8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC11.4□□□□□ -0.59
UBE2D4Q9Y2X8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
UBE2D4Q9Y2X8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
UBE2D4Q9Y2X8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
UBE2D4Q9Y2X8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
UBE2D4Q9Y2X8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
UBE2D4Q9Y2X8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
UBE2D4Q9Y2X8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms