Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 AC019129.2-201ENST00000609837 1235 ntBASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.59■□□□□ 0.09
LRCH1Q9Y2L9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
LRCH1Q9Y2L9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH1Q9Y2L9 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
LRCH1Q9Y2L9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.58■□□□□ 0.09
LRCH1Q9Y2L9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH1Q9Y2L9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
LRCH1Q9Y2L9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH1Q9Y2L9 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.58■□□□□ 0.09
LRCH1Q9Y2L9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.58■□□□□ 0.09
LRCH1Q9Y2L9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH1Q9Y2L9 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH1Q9Y2L9 PCDHA3-202ENST00000532566 4594 ntBASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 MIR648-201ENST00000385046 94 ntBASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LRCH1Q9Y2L9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 DUX4L17-201ENST00000557360 1267 ntBASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 AL441883.1-201ENST00000566170 1045 ntBASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms