Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 PI4KAP1-204ENST00000612579 1703 ntBASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 ME2P1-201ENST00000426028 1970 ntBASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 AL009178.2-201ENST00000597278 2719 ntBASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB4Q9UN71 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 PAWRP1-201ENST00000451083 565 ntBASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 AC004706.3-202ENST00000621574 984 ntBASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms