Protein–RNA interactions for Protein: Q9UHB7

AFF4, AF4/FMR2 family member 4, humanhuman

Known RBP Predictions only

Length 1,163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4Q9UHB7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AFF4Q9UHB7 HLA-A-202ENST00000376806 1854 ntBASIC17.15■□□□□ 0.34
AFF4Q9UHB7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AFF4Q9UHB7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
AFF4Q9UHB7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AFF4Q9UHB7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AFF4Q9UHB7 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.15■□□□□ 0.34
AFF4Q9UHB7 AC078925.2-201ENST00000624013 1973 ntBASIC17.15■□□□□ 0.34
AFF4Q9UHB7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
AFF4Q9UHB7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.15■□□□□ 0.34
AFF4Q9UHB7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.15■□□□□ 0.34
AFF4Q9UHB7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.15■□□□□ 0.34
AFF4Q9UHB7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.15■□□□□ 0.34
AFF4Q9UHB7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
AFF4Q9UHB7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.34
AFF4Q9UHB7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AFF4Q9UHB7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 AC044860.1-202ENST00000559481 777 ntBASIC17.13■□□□□ 0.33
AFF4Q9UHB7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 MIR4321-201ENST00000592276 80 ntBASIC17.13■□□□□ 0.33
AFF4Q9UHB7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.13■□□□□ 0.33
AFF4Q9UHB7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 RNF216P1-203ENST00000404404 2427 ntBASIC17.13■□□□□ 0.33
AFF4Q9UHB7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AFF4Q9UHB7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 AL353779.1-201ENST00000434793 351 ntBASIC17.12■□□□□ 0.33
AFF4Q9UHB7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AFF4Q9UHB7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms